Sunday, August 24, 2014
I write a lot of scripts in my day-to-day sequence analysis of microbiome data. While a lot of these are a bit project specific, some of these could be useful for others in their sequence analysis projects. A while back I posted about a script for formatting Qiime output files for input into the Lefse analysis toolkit, but now I am thinking it would be worth adding more. Therefore, I changed the "Lefse formatting" repository to be a more general "microbiome sequence analysis toolkit" repository. This seems like a nice place to periodically add scripts for easy use by others. To get this new repo started, I added a new script for removing "block fasta" formatting from fasta sequence files. It's relatively simple, but I think it's also pretty useful.
Sunday, August 3, 2014
| The Marine Microbiology Initiative is striving to build a|
community of virus ecology resources online.